BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017A04LP1|AL427098
(943 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1145 1779 0.0
>3x_Contig1145
Length = 5226
Score = 1779 bits (895), Expect = 0.0
Identities = 934/943 (99%), Gaps = 5/943 (0%)
Strand = Plus / Minus
Query: 1 gatccagtagcgatgatcggtgggtcaaccactagaagatatttgaatgaacatgtaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4029 gatccagtagcgatgatcggtgggtcaaccactagaagatatttgaatgaacatgtaaca 3970
Query: 61 aaacatttattggaaggaatgaaactgatagccagagaaaagcccgaggatccacttcga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3969 aaacatttattggaaggaatgaaactgatagccagagaaaagcccgaggatccacttcga 3910
Query: 121 gtattaggccagttcttgattgatgcaagcgaaatgaaccagaagccttcatcgtagata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3909 gtattaggccagttcttgattgatgcaagcgaaatgaaccagaagccttcatcgtagata 3850
Query: 181 tgaatttacgactttcttaaactaaagacatctgtattattattattattttatatatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3849 tgaatttacgactttcttaaactaaagacatctgtattattattattattttatatatgt 3790
Query: 241 mtgtyttccttcaatgtccagttcacttatagatatctacatgaactaaaacttctcctc 300
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3789 atgttttccttcaatgtccagttcacttatagatatctacatgaactaaaacttctcctc 3730
Query: 301 ttcgagtatttctgatggcttatttaamatcttcaaaccataaccgcataaaatgcttag 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 3729 ttcgagtatttctgatggcttatttaaaatcttcaaaccataaccgcataaaatgcttag 3670
Query: 361 aagcccgagtctccagcctcgccatagttcactaattctgtcgcactgcttgaataccgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3669 aagcccgagtctccagcctcgccatagttcactaattctgtcgcactgcttgaataccgt 3610
Query: 421 cagtagatggattggtactcccttggttttatgattaacatttcagattgtacttggaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3609 cagtagatggattggtactcccttggttttatgattaacatttcagattgtacttggaat 3550
Query: 481 gggttttctgtgaacaagaacttcacttgactccttctcaatagattctcaattggtagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3549 gggttttctgtgaacaagaacttcacttgactccttctcaatagattctcaattggtagc 3490
Query: 541 tttacgaagagttcacaaactttactgcagaactttaatgtg-ttgtacagaatcacatt 599
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 3489 tttacgaagagttcacaaactttactgcagaactttaatgtgtttgtacagaatcacatt 3430
Query: 600 agtgaatttgtcaacattgaactgatgatatagtattgcaccggttaatttgctaaatcc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3429 agtgaatttgtcaacattgaactgatgatatagtattgcaccggttaatttgctaaatcc 3370
Query: 660 tgtccctaccagggaatataatatattcaaaaagaccaattccttatttagtttggata- 718
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3369 tgtccctaccagggaatataatatattcaaaaagaccaattccttatttagtttggatag 3310
Query: 719 tgttttccctccaggaccattttctcaacaa-ttttcttaagga-tctatcgttatcaga 776
||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 3309 tgttttccctccaggaccattttctcaacaatttttcttaaggattctatcgttatcaga 3250
Query: 777 aagggaaccatcgttacgaacagaagagataattaacctaactctgacgagatccaacgg 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3249 aagggaaccatcgttacgaacagaagagataattaacctaactctgacgagatccaacgg 3190
Query: 837 taataatacaagtcttgtcatgcaacttgccaaaagaattaagcttgcggatttcgttac 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3189 taataatacaagtcttgtcatgcaacttgccaaaagaattaagcttgcggatttcgttac 3130
Query: 897 gtctggtgagtgtatgatatcaat-aaatatggatctggawtt 938
|||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 3129 gtctggtgagtgtatgatatcaataaaatatggatctggaatt 3087
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7853
Number of Sequences: 1807
Number of extensions: 7853
Number of successful extensions: 235
Number of sequences better than 1.0e-20: 1
length of query: 943
length of database: 10,358,551
effective HSP length: 16
effective length of query: 927
effective length of database: 10,329,639
effective search space: 9575575353
effective search space used: 9575575353
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)